compass
Contents
Compass is used to do some preprocessing of the user's input. The main task of compass is to read molecule geometry and basis set and store them as internal data structure. The point group symmetry of molecule could be determined automatically and symmetry information will be generated.
General keywords
Basis
The following line is a string to specify the basis set name used in calculation. This string is used to locate the file in which basis set are stored. In general, there is a file with the name of capital "string" in the directory basis_library of BDF main directory. Except for the directory basis_library, the work directory will also be searched to locate the basis set. Thus, users can write the basis set into a file with the name of "NAME" in work directory and specify in input file.
Examples:
$Compass Basis cc-pvdz Geometry H 0.000 0.000 0.707 H 0.000 0.000 -0.707 End of Geometry $End
Geometry
The cartesian coordinates of a molecule are written as following lines with the format of
- Atom x y z
The string "End of geometry" is used to specify the end of the geometry input. The "xyz" formatted file can also be used as molecule geometry input. Users can write molecule geometry into a file named "test.xyz" (if your input file named test.inp, the input geometry should be stored in test.xyz using standard xyz format) and put it in work directory. The compass will read molecule geometry from this file.
Examples:
$Compass Basis cc-pvdz Geometry H 0.000 0.000 0.707 H 0.000 0.000 -0.707 End of Geometry $End
$Compass Basis cc-pvdz Geometry XYZ End of Geometry $End
Group
The following line is used to set the point group of the molecule used in calculation. Usually, the point group can be determined by BDF automatically. However, the point group with degenerated representation is only supported by BDF in HF/DFT/TDDFT calculations. In general, D2h and subgroup is used by most of BDF modules. By default, BDF will use highest ablian group of a molecules point group in calculation if use do not set "Skeleton" keyword. Users can specify the subgroup of molecule point group in calculation.
Examples:
A linear molecule CO has the Cinfv linear symmetry. We can use highest albeilian subgroup in calculation
$Compass Basis sto-3g Geometry C 0.0 0.0 0.0 H 0.0 0.0 1.6 End of Geometry Group C(2v) $End
Nosymm
This keyword is used to turn off the molecule symmetry in calculation.
Unit
This keyword is use to set unit of input coordinate. "Bohr" is for atomic unit. "Angstrom" is for angstrom. The angstrom is used for default.
Examples:
$Compas Basis cc-pvdz Geometry H 0.000 0.000 1.5 H 0.000 0.000 -1.5 End of Geometry Unit Bohr $End
Skeleton
This keyword ask the skeleton matrix method is used in calculation. The symmetry adapted integral will not be generated and the symmetry independent integrals will be used to calculate the skeleton Fock/J/K matrices in calculation. The integral direct SCF and post-HF calculation use this method in calculation. The none-abelian group can be used in calculation when Skeleton is asked.
Example:
A CH4 molecule has the Td symmetry, we can use Td group in SCF calculation.
$Compass Title CH4 Molecule test run, 3-21G Basis 3-21G Geometry C 0.000000 0.000000 0.000000 H 0.617765 0.617765 0.617765 H -0.617765 -0.617765 0.617765 H -0.617765 0.617765 -0.617765 H 0.617765 -0.617765 -0.617765 End geometry Skeleton $End
Extcharge
Define type of external charge in calculation. A file with name bdftask.extcharge should be put into work directory to input charges and coordinates. Value should be point and gaussian.
$COMPASS Title H2 Molecule test run, 3-21G Basis cc-pvdz Geometry H 0.000 0.000 0.70018162 H 0.000 0.000 -0.70018162 X 0.000 0.000 0.80018162 X 0.000 0.000 -0.80018162 X 0.000 0.000 0.60018162 X 0.000 0.000 -0.60018162 End geometry Check Unit Bohr nosymm ExtCharge Point $END
Expert keywords
Uncontract
This keyword asks to use primitive GTOs instead of contracted ones.
Kratzer
Non-adibatic diatom molecule calculation. Next line is used to specify the parameters of Kratzer potential. Three integers and two floats are needed.
$COMPASS Title H2 Molecule test run, 3-21G Basis cc-pvdz Geometry H 0.000 0.000 0.70018162 H 0.000 0.000 -0.70018162 X 0.000 0.000 0.80018162 X 0.000 0.000 -0.80018162 X 0.000 0.000 0.60018162 X 0.000 0.000 -0.60018162 End geometry Check Unit Bohr nosymm Kratzer # maxnu maxj ngausslag re de 10 0 50 1.40036324 0.365148 $END
Keyword4
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